update blind estimate to output a confidence map as a mask
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@@ -480,7 +480,7 @@ class BlindTipEstimate:
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OUTPUTS = (
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('DATA_FIELD', 'tip'),
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('DATA_FIELD', 'certainty'),
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('IMAGE', 'certainty'),
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)
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FUNCTION = "process"
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@@ -574,9 +574,7 @@ class BlindTipEstimate:
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cmap_thresh = 50.0 * step
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cmap_data = _certainty_map_fast(surf, tip_data, rsurf, xc, yc, cmap_thresh)
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cmap_field = field.replace(
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data=cmap_data,
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si_unit_z="", # certainty is dimensionless
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)
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# Convert the binary 0/1 float map to a uint8 mask (0 = uncertain, 255 = certain).
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cmap_mask = (cmap_data * 255).astype(np.uint8)
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return (tip_field, cmap_field)
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return (tip_field, cmap_mask)
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@@ -16,11 +16,12 @@ def run_blind(field, n_pixels=17, threshold=0.0, method="partial", use_edges=Fal
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# ── Output types and dimensions ──────────────────────────────────────────────
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def test_outputs_are_data_fields():
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def test_outputs_are_correct_types():
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field = make_field(shape=(32, 32), xreal=32e-9, yreal=32e-9)
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tip, certainty = run_blind(field, n_pixels=9)
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assert isinstance(tip, DataField)
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assert isinstance(certainty, DataField)
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assert isinstance(certainty, np.ndarray)
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assert certainty.dtype == np.uint8
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def test_tip_output_shape():
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@@ -40,16 +41,16 @@ def test_tip_n_pixels_even_bumped():
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def test_certainty_output_matches_field_shape():
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field = make_field(shape=(48, 64))
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_, certainty = run_blind(field, n_pixels=9)
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assert certainty.data.shape == field.data.shape
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assert certainty.shape == field.data.shape
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def test_certainty_is_binary():
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"""Certainty map values must all be 0.0 or 1.0."""
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"""Certainty mask values must all be 0 or 255."""
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field = make_field(shape=(32, 32), xreal=32e-9, yreal=32e-9)
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_, certainty = run_blind(field, n_pixels=9)
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vals = np.unique(certainty.data)
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vals = np.unique(certainty)
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for v in vals:
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assert v in (0.0, 1.0), f"Non-binary certainty value: {v}"
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assert v in (0, 255), f"Non-binary certainty value: {v}"
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# ── Tip conventions ───────────────────────────────────────────────────────────
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@@ -137,7 +138,7 @@ def test_full_method_runs():
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field = make_field(shape=(24, 24), xreal=24e-9, yreal=24e-9)
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tip, certainty = run_blind(field, n_pixels=7, method="full")
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assert isinstance(tip, DataField)
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assert isinstance(certainty, DataField)
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assert isinstance(certainty, np.ndarray)
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# ── Certainty increases with sharp features ───────────────────────────────────
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@@ -165,4 +166,4 @@ def test_certainty_nonzero_for_sharp_image():
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measured = make_field(data=measured_data, xreal=n * pixel_size, yreal=n * pixel_size)
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_, certainty = run_blind(measured, n_pixels=17, method="partial")
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assert certainty.data.sum() > 0, "No certain pixels found for a sharp image"
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assert certainty.sum() > 0, "No certain pixels found for a sharp image"
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