import numpy as np from backend.data_types import LineData from backend.node_registry import get_node_info from tests.node_tests._shared import make_field def test_line_correction(): from backend.nodes.line_correction import LineCorrection node = LineCorrection() assert get_node_info("LineCorrection")["category"] == "Level & Correct" rows = 96 cols = 128 y = np.linspace(0.0, 1.0, rows, dtype=np.float64) x = np.linspace(-1.0, 1.0, cols, dtype=np.float64) signal = ( 0.15 * np.sin(8.0 * np.pi * x)[None, :] + 0.05 * np.cos(4.0 * np.pi * y)[:, None] ) row_offsets = 1.5 * np.sin(3.0 * np.pi * y) + 0.25 * np.cos(7.0 * np.pi * y) field = make_field(data=signal + row_offsets[:, None], xreal=2.5e-6, yreal=1.5e-6) corrected, background, shifts = node.process( field, method="median", direction="horizontal", masking="ignore", trim_fraction=0.05, polynomial_degree=1, ) expected_shifts = row_offsets - row_offsets.mean() assert corrected.data.shape == field.data.shape assert background.data.shape == field.data.shape assert np.allclose(corrected.data + background.data, field.data) assert isinstance(shifts, LineData) assert shifts.x_unit == field.si_unit_xy assert shifts.y_unit == field.si_unit_z assert np.isclose(shifts.x_axis[0], 0.0) assert np.isclose(shifts.x_axis[-1], field.yreal) assert np.corrcoef(shifts.data, expected_shifts)[0, 1] > 0.999 assert corrected.data.mean(axis=1).std() < field.data.mean(axis=1).std() * 0.03 poly_background = ( row_offsets[:, None] + (0.35 * y - 0.15)[:, None] * x[None, :] + (0.10 + 0.05 * y)[:, None] * (x[None, :] ** 2) ) poly_signal = 0.08 * np.sin(10.0 * np.pi * x)[None, :] * (1.0 + 0.15 * np.cos(2.0 * np.pi * y)[:, None]) poly_field = make_field(data=poly_signal + poly_background) leveled, poly_bg, poly_shifts = node.process( poly_field, method="polynomial", direction="horizontal", masking="ignore", trim_fraction=0.05, polynomial_degree=2, ) assert np.allclose(leveled.data + poly_bg.data, poly_field.data) assert np.corrcoef(leveled.data.ravel(), poly_signal.ravel())[0, 1] > 0.995 assert len(poly_shifts) == rows def test_line_correction_methods(): from backend.nodes.line_correction import LineCorrection from tests.node_tests._shared import make_field node = LineCorrection() rows, cols = 64, 80 rng = np.random.default_rng(7) signal = rng.standard_normal((rows, cols)) * 0.1 row_offsets = rng.standard_normal(rows) * 2.0 data = signal + row_offsets[:, None] field = make_field(data=data) # median_diff c, b, s = node.process(field, method="median_diff", direction="horizontal", masking="ignore", trim_fraction=0.05, polynomial_degree=1) assert np.allclose(c.data + b.data, field.data) assert len(s) == rows # trimmed_mean c, b, s = node.process(field, method="trimmed_mean", direction="horizontal", masking="ignore", trim_fraction=0.2, polynomial_degree=1) assert np.allclose(c.data + b.data, field.data) # trimmed_diff c, b, s = node.process(field, method="trimmed_diff", direction="horizontal", masking="ignore", trim_fraction=0.2, polynomial_degree=1) assert np.allclose(c.data + b.data, field.data) # step c, b, s = node.process(field, method="step", direction="horizontal", masking="ignore", trim_fraction=0.05, polynomial_degree=1) assert np.allclose(c.data + b.data, field.data) assert len(s) == rows def test_line_correction_vertical(): from backend.nodes.line_correction import LineCorrection from tests.node_tests._shared import make_field node = LineCorrection() rows, cols = 48, 64 col_offsets = np.random.default_rng(3).standard_normal(cols) * 1.5 data = np.random.default_rng(3).standard_normal((rows, cols)) * 0.1 + col_offsets[None, :] field = make_field(data=data) c, b, s = node.process(field, method="median", direction="vertical", masking="ignore", trim_fraction=0.05, polynomial_degree=1) assert c.data.shape == field.data.shape assert np.allclose(c.data + b.data, field.data) # vertical shift line length = number of columns assert len(s) == cols assert s.x_axis is not None assert np.isclose(s.x_axis[-1], field.xreal) def test_line_correction_with_mask(): from backend.nodes.line_correction import LineCorrection from tests.node_tests._shared import make_field node = LineCorrection() rows, cols = 32, 48 data = np.random.default_rng(9).standard_normal((rows, cols)) * 0.1 row_offsets = np.linspace(0, 3.0, rows) data += row_offsets[:, None] field = make_field(data=data) # mask covers right half mask = np.zeros((rows, cols), dtype=np.uint8) mask[:, cols // 2:] = 255 c_excl, b_excl, _ = node.process(field, method="median", direction="horizontal", masking="exclude", trim_fraction=0.05, polynomial_degree=1, mask=mask) assert np.allclose(c_excl.data + b_excl.data, field.data) c_incl, b_incl, _ = node.process(field, method="median", direction="horizontal", masking="include", trim_fraction=0.05, polynomial_degree=1, mask=mask) assert np.allclose(c_incl.data + b_incl.data, field.data)